Fitness data for BPHYT_RS17355 in Burkholderia phytofirmans PsJN

phenylacetic acid degradation protein
SEED: Phenylacetic acid degradation protein PaaD, thioesterase
KEGG: phenylacetic acid degradation protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
carbon source Phenylacetic 5 mM (C) -3.9 -9.4 compare
carbon source Phenylacetic 5 mM (C) -2.7 -5.5 compare
phage 36hr PHYTO9 MOI 0.1 -0.3 -1.4 compare
phage 24hr PHYTO10 MOI 10 +0.3 +1.5 compare
phage 36hr PHYTO1 MOI 1 +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days +0.3 +1.6 compare
carbon source 2-Deoxy-D-Ribose (C) +0.3 +2.2 compare
carbon source Malonic (C) +0.3 +1.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.8 compare
nophagecontrol 36hr Phyto Lib only +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.6 compare
carbon source Malonic (C) +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare