Fitness data for BPHYT_RS17145 in Burkholderia phytofirmans PsJN

type II secretion system protein E
SEED: Type IV fimbrial assembly, ATPase PilB
KEGG: type IV pilus assembly protein PilB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Malonic (C) -0.5 -2.1 compare
phage 24hr PHYTO11 MOI 1 -0.4 -1.8 compare
phage 24hr PHYTO11 MOI 0.1 -0.4 -1.5 compare
carbon source Disodium Glutarate (C) -0.4 -2.2 compare
phage 24hr PHYTO4 MOI 10 -0.3 -1.3 compare
carbon source Protocatechuic Acid (C) -0.3 -1.4 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +2.0 compare
phage P. phyto PHYTO2 MOI 1 +0.4 +1.4 compare
carbon source D,L-Lactate (C) +0.4 +2.1 compare
carbon source D-Glucose (C) +0.4 +2.1 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +2.0 compare
carbon source D-Galacturonic Acid (C) +0.4 +2.2 compare
phage P. phyto PHYTO2 MOI 1 +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +2.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.7 compare