Fitness data for BPHYT_RS16925 in Burkholderia phytofirmans PsJN

D-galactose ABC transporter, permease component (from data)
Original annotation: arabinose ABC transporter permease
SEED: L-arabinose transport system permease protein (TC 3.A.1.2.2)
KEGG: L-arabinose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
carbon source D-Galactose (C) -1.9 -8.3 compare
carbon source L-Arabinose (C) -0.5 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +0.9 compare
carbon source D-Glucose 20 mM (C) +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +2.1 compare
vitamin With vitamins t1 +0.5 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
vitamin No vitamins t2 +0.5 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.6 compare
phage 36hr PHYTO4 MOI 1 +0.6 +3.1 compare
carbon source D-Glucose (C) +0.6 +3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.6 +2.0 compare
carbon source D-Glucose (C) +0.6 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.9 compare
carbon source D-Glucosamine Hydrochloride (C) +1.0 +1.4 compare