Fitness data for BPHYT_RS16405 in Burkholderia phytofirmans PsJN

galactonate dehydratase [EC: 4.2.1.6] (from data)
Original annotation: galactonate dehydratase
SEED: Gluconate dehydratase (EC 4.2.1.39)
KEGG: galactonate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Galactose (C) -2.6 -12.2 compare
phage 36hr PHYTO10 MOI 10 -0.4 -1.9 compare
phage 36hr PHYTO11 MOI 0.1 +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.9 compare
phage 24hr PHYTO6 MOI 1 +0.3 +1.6 compare
nophagecontrol 36hr Phyto Lib Only +0.3 +1.8 compare
nutrient casaminos +0.3 +2.0 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.3 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.3 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.3 compare
phage 24hr PHYTO2 MOI 0.1 +0.4 +1.8 compare
carbon source Sebacic (C) +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.4 compare
phage 36hr PHYTO4 MOI 1 +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.0 compare
phage 36hr PHYTO10 MOI 10 +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.3 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.5 +3.0 compare
phage 24hr PHYTO7 MOI 1 +0.6 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.3 compare