Fitness data for BPHYT_RS16330 in Burkholderia phytofirmans PsJN

general secretion pathway protein H
SEED: Type IV pilin PilA
KEGG: type IV pilus assembly protein PilA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 36hr PHYTO2 MOI 1 -0.8 -1.4 compare
phage 24hr PHYTO6 MOI 0.1 -0.7 -1.9 compare
phage 24hr PHYTO10 MOI 10 -0.7 -2.4 compare
phage 36hr PHYTO6 MOI 10 -0.7 -1.6 compare
phage P. phyto PHYTO2 MOI 0.1 -0.6 -2.2 compare
phage 36hr PHYTO2 MOI 1 -0.6 -2.4 compare
phage 24hr PHYTO2 MOI 1 -0.6 -1.9 compare
carbon source Suberic (C) -0.6 -3.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.5 compare
carbon source Sebacic (C) -0.5 -1.2 compare
phage 24hr PHYTO6 MOI 10 -0.5 -2.1 compare
phage P. phyto PHYTO2 MOI 1 -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.3 compare
phage 36hr PHYTO1 MOI 10 -0.4 -1.3 compare
phage 24hr PHYTO3 MOI 1 -0.4 -1.3 compare
phage 36hr PHYTO10 MOI 10 -0.4 -1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.6 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +3.1 compare