Fitness data for BPHYT_RS16280 in Burkholderia phytofirmans PsJN

branched-chain amino acid ABC transporter permease
SEED: Branched-chain amino acid transport protein AzlC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Phenylacetic 5 mM (C) -0.8 -3.5 compare
vitamin With vitamins t2 -0.5 -2.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.4 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.4 -2.4 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.4 -1.9 compare
carbon source Phenylacetic 5 mM (C) -0.4 -1.9 compare
nutrient L-Histidine -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.4 +1.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.4 compare
carbon source Putrescine (C) +0.4 +2.5 compare
nitrogen source Uridine (N) +0.4 +1.9 compare
carbon source Protocatechuic Acid (C) +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.0 compare
nitrogen source L-Serine (N) +0.4 +2.1 compare
nitrogen source NAG (N) +0.4 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.9 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.9 +4.1 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +1.0 +4.5 compare