Fitness data for BPHYT_RS16115 in Burkholderia phytofirmans PsJN

ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data)
Original annotation: sugar ABC transporter substrate-binding protein
SEED: Various polyols ABC transporter, periplasmic substrate-binding protein
KEGG: sorbitol/mannitol transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Sorbitol (C) -3.8 -12.2 compare
phage 36hr PHYTO2 MOI 1 -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.6 compare
stress A22 0.005 mg/ml -0.3 -2.1 compare
phage 24hr PHYTO2 MOI 0.1 -0.3 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.5 compare
phage 36hr PHYTO4 MOI 1 +0.3 +1.2 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.9 compare
carbon source D-Xylose (C) +0.3 +1.8 compare
phage 24hr PHYTO3 MOI 10 +0.3 +1.3 compare
carbon source D-Glucose (C) +0.4 +2.2 compare
nitrogen source L-Serine (N) +0.4 +2.0 compare
phage 24hr PHYTO11 MOI 1 +0.4 +1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +2.1 compare
carbon source Malonic (C) +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +2.4 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.5 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +3.5 compare