Fitness data for BPHYT_RS16055 in Burkholderia phytofirmans PsJN

sugar ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 36hr PHYTO11 MOI 0.1 -1.0 -2.0 compare
carbon source D-Glucose (C) -1.0 -2.6 compare
phage P. phyto PHYTO2 MOI 0.1 -1.0 -2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.0 -1.4 compare
carbon source D-Glucose (C) -0.9 -1.6 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.9 -1.6 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.9 -1.6 compare
carbon source Gly-Glu (C) -0.8 -1.8 compare
temperature LB, 37C -0.8 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.4 compare
carbon source Malonic (C) -0.7 -1.4 compare
vitamin With vitamins t2 +0.8 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.6 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.9 +2.2 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.9 +3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +3.0 compare
nitrogen source L-Glutamic (N) +1.1 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +1.2 compare