Fitness data for BPHYT_RS16020 in Burkholderia phytofirmans PsJN

AsnC family transcriptional regulator
SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source L-Tryptophan (C) -4.3 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.1 -2.0 compare
motility inner cut, LB soft agar motility assay -2.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -2.1 compare
carbon source Azelaic (C) -1.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.5 -1.8 compare
carbon source Suberic (C) -1.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -1.4 compare
nitrogen source L-Isoleucine (N) -1.3 -1.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.3 -1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.7 compare
carbon source Sebacic (C) -1.1 -1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.1 -1.2 compare
carbon source Dodecandioic (C) -1.1 -1.7 compare
phage 36hr PHYTO11 MOI 1 +1.1 +1.6 compare
phage 36hr PHYTO8 MOI 10 +1.2 +2.9 compare
phage 24hr PHYTO3 MOI 0.1 +1.4 +3.1 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.4 +1.7 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +2.7 +4.9 compare