Fitness data for BPHYT_RS15780 in Burkholderia phytofirmans PsJN

ABC transporter ATP-binding protein
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Glucosamine Hydrochloride (C) -1.2 -8.0 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.1 compare
phage 36hr PHYTO10 MOI 10 -0.4 -1.6 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.4 -1.9 compare
nitrogen source L-Serine (N) -0.3 -1.8 compare
carbon source D-Glucose 20 mM (C) -0.3 -2.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.5 compare
phage 36hr PHYTO2 MOI 1 +0.3 +1.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.3 +1.9 compare
phage 36hr PHYTO3 MOI 1 +0.4 +1.9 compare
phage PHYTO3 MOI 0.1 +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4 +1.7 compare
carbon source Protocatechuic Acid (C) +0.4 +1.7 compare
carbon source Disodium Glutarate (C) +0.4 +1.9 compare
carbon source Dodecandioic (C) +0.4 +2.1 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.8 compare