Fitness data for BPHYT_RS15760 in Burkholderia phytofirmans PsJN

nickel transporter
SEED: HoxN/HupN/NixA family nickel/cobalt transporter
KEGG: high-affinity nickel-transport protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.9 -1.0 compare
phage 36hr PHYTO7 MOI 0.1 -0.6 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.6 +2.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.6 +1.5 compare
carbon source Protocatechuic Acid (C) +0.6 +1.8 compare
stress Nickel (II) chloride 1 mM +0.6 +2.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.6 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.2 compare
carbon source 2-Deoxy-D-Ribose (C) +0.6 +2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.2 compare
supernatant control Vogels_fungal_media 0.1X +0.7 +2.5 compare
carbon source Phenylacetic 5 mM (C) +0.8 +2.5 compare
supernatant control Vogels_fungal_media 0.1X +0.8 +2.4 compare
phage P. phyto corn MOI 1 +0.9 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.9 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +1.0 +3.2 compare
carbon source L-Fucose (C) +1.0 +3.6 compare
supernatant control Vogels_fungal_media; pH 5.5 +1.0 +2.6 compare