Fitness data for BPHYT_RS15605 in Burkholderia phytofirmans PsJN

ABC transporter permease
SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Proline (C) -5.0 -14.4 compare
nitrogen source L-Proline (N) -3.5 -10.5 compare
carbon source L-Asparagine (C) -2.7 -14.1 compare
nitrogen source L-Lysine (N) -2.2 -5.8 compare
carbon source L-Glutamine (C) -2.2 -10.1 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.6 -6.3 compare
nitrogen source L-Phenylalanine (N) -1.5 -7.6 compare
stress Benzethonium chloride 0.0016 mM -1.5 -7.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.3 -7.6 compare
nitrogen source L-Isoleucine (N) -1.2 -5.0 compare
carbon source L-Histidine (C) -1.2 -8.8 compare
carbon source L-Tryptophan (C) -1.1 -7.8 compare
carbon source D-Alanine (C) -1.1 -6.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -1.0 -5.4 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.0 -4.6 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.9 -3.4 compare
nitrogen source L-Glutamic (N) -0.8 -3.2 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -2.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.7 -3.5 compare
nitrogen source L-Citrulline (N) +0.7 +3.6 compare