Fitness data for BPHYT_RS15590 in Burkholderia phytofirmans PsJN

amino acid ABC transporter ATPase
SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source L-Proline (N) -4.4 -6.1 compare
carbon source L-Proline (C) -4.2 -4.6 compare
carbon source L-Asparagine (C) -3.1 -9.8 compare
carbon source L-Glutamine (C) -2.9 -8.1 compare
nitrogen source L-Lysine (N) -2.2 -4.2 compare
carbon source L-Histidine (C) -1.6 -8.2 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.5 -4.0 compare
nitrogen source L-Isoleucine (N) -1.5 -3.8 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.2 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -1.1 -3.7 compare
nitrogen source L-Phenylalanine (N) -1.1 -3.2 compare
stress Benzethonium chloride 0.0016 mM -1.1 -4.0 compare
carbon source D-Alanine (C) -1.1 -4.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.1 -3.0 compare
carbon source L-Tryptophan (C) -1.0 -3.2 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -4.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -1.0 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.2 compare
carbon source Malonic (C) +1.1 +5.1 compare