Fitness data for BPHYT_RS15240 in Burkholderia phytofirmans PsJN

excinuclease ABC subunit A
SEED: Excinuclease ABC subunit A paralog of unknown function
KEGG: excinuclease ABC subunit A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
nitrogen source L-Lysine (N) -0.5 -2.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.3 -2.1 compare
phage 36hr PHYTO8 MOI 0.1 -0.3 -1.9 compare
carbon source Sebacic (C) -0.3 -1.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.3 -1.4 compare
phage 36hr PHYTO1 MOI 1 -0.3 -1.9 compare
nitrogen source L-Glutamic (N) -0.3 -1.6 compare
phage 24hr PHYTO3 MOI 1 +0.2 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.3 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.2 +1.6 compare
motility outer cut, LB soft agar motility assay +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 +1.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.9 compare
motility inner cut, LB soft agar motility assay +0.3 +2.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +2.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.0 compare