Fitness data for BPHYT_RS14980 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Periplasmic molybdate-binding domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 24hr PHYTO4 MOI 10 -0.9 -3.4 compare
phage 24hr PHYTO6 MOI 1 -0.7 -1.8 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.6 -2.7 compare
nophagecontrol 36hr Phyto Lib Only -0.6 -2.4 compare
phage 36hr PHYTO10 MOI 10 -0.5 -1.9 compare
nitrogen source Putrescine (N) -0.5 -1.8 compare
nitrogen source L-Isoleucine (N) -0.5 -1.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -1.6 compare
phage 36hr PHYTO10 MOI 10 -0.4 -1.8 compare
phage 24hr PHYTO MOI 0.1 -0.4 -1.8 compare
phage 36hr PHYTO10 MOI 1 -0.4 -2.2 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.0 compare
phage 24hr PHYTO9 MOI 0.1 +0.5 +2.2 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.8 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.6 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare