Fitness data for BPHYT_RS14580 in Burkholderia phytofirmans PsJN

ATP-dependent DNA helicase
SEED: ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog
KEGG: DNA helicase II / ATP-dependent DNA helicase PcrA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage 24hr PHYTO6 MOI 1 -0.3 -2.0 compare
phage 36hr PHYTO7 MOI 1 -0.3 -2.1 compare
phage 24hr PHYTO6 MOI 0.1 -0.3 -1.8 compare
phage 24hr PHYTO3 MOI 1 -0.3 -1.6 compare
phage 36hr PHYTO4 MOI 1 -0.3 -1.6 compare
phage 36hr PHYTO8 MOI 10 -0.3 -1.4 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -1.6 compare
phage 36hr PHYTO11 MOI 0.1 -0.2 -1.7 compare
phage 24hr PHYTO8 MOI 1 +0.2 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +1.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.6 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.7 compare
carbon source propionate (C) +0.3 +1.7 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 +0.3 +1.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.9 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.4 +2.2 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.4 compare