Fitness data for BPHYT_RS14005 in Burkholderia phytofirmans PsJN

ABC transporter
SEED: Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 36hr PHYTO1 MOI 1 -1.0 -2.1 compare
phage 24hr PHYTO4 MOI 0.1 -0.9 -1.2 compare
phage 24hr PHYTO6 MOI 10 -0.9 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -1.6 compare
phage PHYTO3 MOI 0.1 -0.9 -1.7 compare
phage 24hr PHYTO6 MOI 0.1 -0.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.0 compare
phage 36hr PHYTO9 MOI 1 -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.4 compare
phage 36hr PHYTO4 MOI 1 -0.8 -1.5 compare
phage 24hr PHYTO2 MOI 0.1 -0.7 -2.2 compare
nitrogen source Uridine (N) +0.7 +1.3 compare
nitrogen source NAG (N) +0.7 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.9 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.0 +3.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.1 +3.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.7 +1.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +2.0 +2.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +2.4 +2.9 compare