Fitness data for BPHYT_RS13950 in Burkholderia phytofirmans PsJN

branched-chain amino acid ABC transporter permease
SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.4 -3.5 compare
carbon source Phenylacetic 5 mM (C) -1.1 -3.8 compare
nitrogen source L-Lysine (N) -0.9 -1.7 compare
carbon source Phenylacetic 5 mM (C) -0.7 -2.9 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.6 -1.9 compare
nitrogen source L-Glutamic (N) -0.6 -1.5 compare
nitrogen source Carnitine Hydrochloride (N) -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.5 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.5 compare
carbon source D-Xylose (C) +0.5 +2.7 compare
carbon source Protocatechuic Acid (C) +0.5 +1.8 compare
motility outer cut, LB soft agar motility assay +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.0 compare