Fitness data for BPHYT_RS13940 in Burkholderia phytofirmans PsJN

ABC transporter
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Phenylacetic 5 mM (C) -0.8 -3.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 -3.1 compare
carbon source Phenylacetic 5 mM (C) -0.5 -1.7 compare
stress Paraquat dichloride 0.032 mg/ml -0.5 -1.7 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -1.4 compare
phage 24hr PHYTO3 MOI 10 +0.5 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.0 compare
carbon source adipate (C) +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.8 compare
nitrogen source Ammonium chloride (N) +0.5 +1.4 compare
carbon source Protocatechuic Acid (C) +0.5 +3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.8 compare
phage 36hr PHYTO11 MOI 0.1 +0.5 +1.9 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.6 +1.9 compare
motility inner cut, LB soft agar motility assay +0.6 +2.8 compare
carbon source Sebacic (C) +0.6 +2.9 compare
phage 36hr PHYTO7 MOI 1 +0.6 +2.3 compare
phage 24hr PHYTO6 MOI 10 +0.7 +3.2 compare
carbon source D-Glucose 20 mM (C) +0.8 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +2.4 compare