Fitness data for BPHYT_RS13610 in Burkholderia phytofirmans PsJN

MerR family transcriptional regulator
SEED: Transcriptional regulator, MerR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.1 -3.1 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -2.9 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.3 -4.2 compare
phage P. phyto PHYTO2 MOI 1 -2.1 -1.5 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -1.9 -1.7 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.9 -2.3 compare
nitrogen source L-Lysine (N) -1.8 -2.1 compare
motility outer cut, LB soft agar motility assay -1.7 -3.1 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -1.6 -3.6 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -1.5 -3.6 compare
phage 24hr PHYTO2 MOI 1 -1.5 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -2.6 compare
stress Bacitracin 0.25 mg/ml -1.4 -3.5 compare
phage 36hr PHYTO6 MOI 0.1 +1.4 +2.6 compare
phage 36hr PHYTO7 MOI 1 +1.4 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +1.5 +4.6 compare
phage 36hr PHYTO4 MOI 1 +1.6 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +2.8 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +2.1 +3.5 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +3.6 +3.2 compare