Fitness data for BPHYT_RS13590 in Burkholderia phytofirmans PsJN

ABC transporter substrate-binding protein
SEED: ABC transporter amino acid-binding protein
KEGG: polar amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.9 compare
carbon source Protocatechuic Acid (C) -0.6 -1.6 compare
phage 24hr PHYTO10 MOI 10 -0.6 -2.3 compare
carbon source 2-Deoxy-D-Ribose (C) -0.6 -2.3 compare
phage 36hr PHYTO1 MOI 1 +0.5 +2.2 compare
nutrient L-Serine +0.5 +2.6 compare
phage 36hr PHYTO2 MOI 1 +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.6 +1.7 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.5 compare
nutrient casaminos +0.6 +3.4 compare
motility inner cut, LB soft agar motility assay +0.6 +2.4 compare
nutrient casaminos +0.6 +3.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.6 +2.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.5 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.6 +2.5 compare
nutrient L-Histidine +0.7 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.3 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.9 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.0 +2.1 compare