Fitness data for BPHYT_RS13475 in Burkholderia phytofirmans PsJN

2-keto-gluconate dehydrogenase
SEED: Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. phyto PHYTO2 MOI 1 -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.5 compare
r2a control R2A control -0.7 -2.5 compare
phage 36hr PHYTO9 MOI 1 -0.7 -2.5 compare
phage 24hr PHYTO9 MOI 10 -0.6 -1.6 compare
phage 24hr PHYTO9 MOI 0.1 -0.6 -2.4 compare
carbon source succinate (C) -0.6 -1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.6 -1.7 compare
nitrogen source L-Alanine (N) -0.6 -2.3 compare
phage 36hr PHYTO11 MOI 1 -0.5 -1.7 compare
nophagecontrol 24hr Phyto Lib Only -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.7 compare
carbon source Suberic (C) -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.4 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 +2.5 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.7 compare