Fitness data for BPHYT_RS13385 in Burkholderia phytofirmans PsJN

hypothetical protein
SEED: D-Glucosaminate-6-phosphate ammonia-lyase (EC 4.3.1.-)
KEGG: L-seryl-tRNA(Ser) seleniumtransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage 24hr PHYTO3 MOI 10 -2.1 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 -2.6 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.4 -2.0 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -1.2 -2.2 compare
phage 36hr PHYTO6 MOI 0.1 -1.2 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -2.6 compare
phage 24hr PHYTO2 MOI 0.1 -1.2 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.1 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.7 compare
phage P. phyto PHYTO2 MOI 0.1 -1.0 -1.7 compare
phage 24hr PHYTO6 MOI 10 -1.0 -1.2 compare
r2a control R2A control -1.0 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.0 compare
nitrogen source L-Lysine (N) -0.9 -1.9 compare
carbon source adipate (C) -0.9 -1.7 compare
phage 24hr PHYTO2 MOI 1 -0.9 -1.3 compare
phage 24hr PHYTO10 MOI 10 -0.8 -1.2 compare
carbon source L-Fucose (C) -0.8 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.9 +1.8 compare