Fitness data for BPHYT_RS13290 in Burkholderia phytofirmans PsJN

cysteine ABC transporter permease
SEED: Cystine ABC transporter, permease protein
KEGG: polar amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.8 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.4 compare
carbon source Phenylacetic 5 mM (C) -0.6 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.5 -2.3 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 +0.9 compare
phage 24hr PHYTO6 MOI 0.1 +0.5 +1.6 compare
carbon source Malonic (C) +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 +1.2 compare
phage 36hr PHYTO8 MOI 10 +0.6 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +1.3 compare
motility outer cut, LB soft agar motility assay +0.6 +1.8 compare
phage 24hr PHYTO4 MOI 10 +0.6 +1.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.4 compare
nitrogen source L-Glutamic (N) +0.7 +2.7 compare
phage 36hr PHYTO1 MOI 10 +0.8 +1.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +0.8 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.1 compare
phage 24hr PHYTO10 MOI 1 +0.9 +3.0 compare