Fitness data for BPHYT_RS12885 in Burkholderia phytofirmans PsJN

aspartate racemase
SEED: Aspartate racemase (EC 5.1.1.13)
KEGG: aspartate racemase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.6 -2.3 compare
phage 24hr PHYTO8 MOI 1 -0.6 -2.6 compare
phage 24hr PHYTO3 MOI 10 -0.6 -2.2 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.5 -2.8 compare
phage P. phyto PHYTO2 MOI 0.1 -0.5 -2.3 compare
phage 24hr PHYTO MOI 0.1 -0.5 -2.1 compare
phage 36hr PHYTO8 MOI 10 -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.9 compare
phage 36hr PHYTO6 MOI 10 -0.5 -1.7 compare
phage 36hr PHYTO3 MOI 1 -0.4 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.4 -1.3 compare
phage 24hr PHYTO11 MOI 0.1 -0.4 -1.6 compare
nitrogen source L-Citrulline (N) -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
nitrogen source D-Alanine (N) +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
motility inner cut, LB soft agar motility assay +0.5 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +1.7 compare