Fitness data for BPHYT_RS12430 in Burkholderia phytofirmans PsJN

cysteinyl-tRNA synthetase
SEED: Cysteinyl-tRNA synthetase (EC 6.1.1.16)
KEGG: cysteinyl-tRNA synthetase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -0.6 -3.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -3.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.5 -3.7 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.5 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -3.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -3.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.4 -2.3 compare
carbon source Phenylacetic 5 mM (C) -0.4 -2.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.4 -2.2 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 +1.7 compare
phage 36hr PHYTO MOI 0.1 +0.5 +3.2 compare
phage 36hr PHYTO2 MOI 1 +0.5 +2.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 +2.3 compare
stress Bacitracin 0.25 mg/ml +0.8 +5.8 compare