Fitness data for BPHYT_RS12235 in Burkholderia phytofirmans PsJN

DNA repair protein RadA
SEED: DNA repair protein RadA
KEGG: DNA repair protein RadA/Sms

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -2.3 -4.5 compare
stress Lomefloxacin 0.001 mM -2.2 -7.7 compare
phage 24hr PHYTO9 MOI 0.1 -1.1 -2.2 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.0 -2.0 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.9 -1.7 compare
phage 24hr PHYTO8 MOI 1 -0.9 -1.7 compare
nitrogen source L-Lysine (N) -0.9 -2.2 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.8 -3.6 compare
phage 36hr PHYTO2 MOI 1 -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.4 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.8 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.7 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.5 compare
nophagecontrol 24hr Phyto Lib only -0.6 -1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 +1.7 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.8 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.9 +2.1 compare