Fitness data for BPHYT_RS12160 in Burkholderia phytofirmans PsJN

peptide deformylase
SEED: Peptide deformylase (EC 3.5.1.88)
KEGG: peptide deformylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.7 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.5 -3.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.4 -2.2 compare
nophagecontrol 36hr Phyto Lib only -1.1 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -0.9 -2.5 compare
supernatant control Vogels_fungal_media 0.1X -0.9 -1.7 compare
carbon source D-Galactose (C) -0.8 -2.3 compare
stress Chloride 200 mM -0.8 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.2 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.3 compare
motility outer cut, LB soft agar motility assay +0.8 +1.4 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.9 +3.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.9 +3.2 compare
stress Benzethonium chloride 0.0016 mM +0.9 +3.2 compare
temperature LB 37C +1.0 +3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +1.1 compare
temperature LB, 37C +1.3 +3.0 compare
stress Bacitracin 0.25 mg/ml +1.3 +7.2 compare
nitrogen source L-Lysine (N) +1.4 +3.0 compare