Fitness data for BPHYT_RS11900 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -2.3 -2.2 compare
nitrogen source L-Glutamic (N) -1.9 -2.1 compare
phage P. phyto PHYTO2 MOI 1 -1.8 -1.4 compare
phage 36hr PHYTO9 MOI 1 -1.1 -1.5 compare
r2a control R2A control -1.0 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.0 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -0.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.9 -1.2 compare
motility inner cut, LB soft agar motility assay +0.9 +1.8 compare
phage 36hr PHYTO3 MOI 1 +0.9 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +1.0 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +2.6 compare
phage 36hr PHYTO MOI 0.1 +1.0 +2.5 compare
vitamin With vitamins t2 +1.1 +2.4 compare
nitrogen source L-Isoleucine (N) +1.1 +1.9 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +1.1 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +1.5 compare