Fitness data for BPHYT_RS11715 in Burkholderia phytofirmans PsJN

allantoin permease
SEED: Cytosine/purine/uracil/thiamine/allantoin permease family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.7 compare
phage PHYTO3 MOI 0.1 -0.7 -1.7 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.7 -1.8 compare
phage 24hr PHYTO10 MOI 10 -0.6 -1.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.6 -1.2 compare
motility inner cut, LB soft agar motility assay -0.6 -3.1 compare
phage 24hr PHYTO10 MOI 10 -0.6 -1.6 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.6 -1.4 compare
carbon source Tween 20 (C) -0.6 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -1.8 compare
stress Cobalt chloride 0.25 mM -0.5 -1.7 compare
carbon source Phenylacetic 5 mM (C) -0.5 -1.6 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.5 -1.7 compare
motility outer cut, LB soft agar motility assay -0.5 -1.3 compare
phage 36hr PHYTO9 MOI 1 +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.7 +2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.7 +1.5 compare