Fitness data for BPHYT_RS11515 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.3 -3.3 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.0 -3.2 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.8 compare
nitrogen source L-Glutamic (N) +0.7 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +3.3 compare
nitrogen source L-Isoleucine (N) +0.7 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.0 compare
phage 24hr PHYTO6 MOI 0.1 +0.8 +2.5 compare
phage 36hr PHYTO8 MOI 10 +0.8 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.8 +2.0 compare
phage 24hr PHYTO6 MOI 10 +0.8 +2.2 compare
phage 36hr PHYTO2 MOI 1 +0.8 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.9 +2.7 compare
supernatant control Vogels_fungal_media; pH 5.5 +1.0 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 +3.1 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.2 +2.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +1.3 +5.4 compare