Fitness data for BPHYT_RS11285 in Burkholderia phytofirmans PsJN

LacI family transcription regulator
SEED: 2-ketogluconate utilization repressor PtxS
KEGG: LacI family transcriptional regulator, kdg operon repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -2.3 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -2.0 -2.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.9 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.8 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.5 -2.8 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.5 -1.9 compare
carbon source Putrescine (C) -1.4 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.4 -1.8 compare
carbon source Gly-Glu (C) -1.3 -3.3 compare
carbon source D-Alanine (C) -1.3 -3.5 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -1.9 compare
carbon source L-Asparagine (C) -1.3 -1.9 compare
carbon source D-Xylose (C) -1.3 -2.3 compare
carbon source L-Fucose (C) -1.2 -1.5 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.2 -1.6 compare
phage 24hr PHYTO7 MOI 10 -1.2 -2.0 compare
carbon source Xylitol (C) -1.2 -2.6 compare