Fitness data for BPHYT_RS09925 in Burkholderia phytofirmans PsJN

porin
SEED: Outer membrane porin protein 32 precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.6 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
phage 36hr PHYTO6 MOI 0.1 -0.5 -1.9 compare
nitrogen source L-Proline (N) -0.5 -2.3 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -1.8 compare
nophagecontrol 24hr Phyto Lib only -0.5 -2.2 compare
motility outer cut, LB soft agar motility assay -0.5 -2.2 compare
phage 24hr PHYTO7 MOI 10 -0.5 -1.8 compare
phage 24hr PHYTO9 MOI 0.1 -0.5 -1.9 compare
phage 24hr PHYTO9 MOI 10 -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.1 compare
carbon source Phenylacetic 5 mM (C) -0.4 -2.0 compare
temperature LB, 37C -0.4 -2.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +2.8 compare
phage 24hr PHYTO2 MOI 0.1 +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +2.4 compare
phage 36hr PHYTO2 MOI 1 +0.7 +2.6 compare