Fitness data for BPHYT_RS09835 in Burkholderia phytofirmans PsJN

uroporphyrin-III C-methyltransferase
SEED: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
KEGG: uroporphyrin-III C-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Glutamine (C) -0.9 -2.0 compare
pH LB, pH4 -0.8 -1.2 compare
carbon source 2-Deoxy-D-Ribose (C) -0.8 -1.5 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.8 -1.4 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.7 -1.3 compare
carbon source D-Glucose (C) -0.7 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.0 compare
carbon source Phenylacetic 5 mM (C) -0.7 -1.5 compare
lb LB -0.6 -0.9 compare
phage 36hr PHYTO6 MOI 1 +0.6 +1.9 compare
carbon source Tween 20 (C) +0.7 +1.9 compare
phage 24hr PHYTO9 MOI 10 +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.5 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.8 +2.2 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +3.8 compare