Fitness data for BPHYT_RS09725 in Burkholderia phytofirmans PsJN

exopolysaccharide biosynthesis protein
SEED: Polysaccharide export lipoprotein Wza
KEGG: polysaccharide export outer membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -2.4 -3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.2 compare
carbon source D-Glucose 20 mM (C) -1.0 -3.3 compare
phage 24hr PHYTO MOI 0.1 -1.0 -1.8 compare
carbon source Phenylacetic 5 mM (C) -0.9 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.5 compare
phage 24hr PHYTO4 MOI 10 -0.9 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -1.3 compare
phage 24hr PHYTO1 MOI 1 -0.9 -1.4 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.8 -1.5 compare
phage 36hr PHYTO1 MOI 10 -0.8 -1.5 compare
phage 24hr PHYTO1 MOI 10 -0.8 -1.9 compare
phage 36hr PHYTO8 MOI 10 -0.7 -1.6 compare
nitrogen source D-Alanine (N) +0.7 +2.3 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.7 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.3 compare
nitrogen source Carnitine Hydrochloride (N) +0.8 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.5 compare