Fitness data for BPHYT_RS09080 in Burkholderia phytofirmans PsJN

ABC transporter substrate-binding protein
SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage 36hr PHYTO6 MOI 10 -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -2.5 compare
phage 36hr PHYTO9 MOI 0.1 -0.5 -2.0 compare
phage 24hr PHYTO3 MOI 0.1 -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
phage P. phyto corn MOI 1 -0.4 -1.9 compare
phage 24hr PHYTO1 MOI 10 -0.4 -1.8 compare
phage 36hr PHYTO11 MOI 1 -0.4 -2.0 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.0 compare
phage 24hr PHYTO3 MOI 1 -0.4 -1.4 compare
phage 24hr PHYTO6 MOI 10 -0.4 -1.3 compare
phage 24hr PHYTO MOI 0.1 -0.4 -1.7 compare
phage 24hr PHYTO4 MOI 10 -0.4 -1.5 compare
phage 24hr PHYTO6 MOI 0.1 -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.3 compare
carbon source Phenylacetic 5 mM (C) +0.3 +1.6 compare
nutrient L-Serine +0.4 +2.4 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.3 compare