Fitness data for BPHYT_RS08560 in Burkholderia phytofirmans PsJN

cysteine ABC transporter substrate-binding protein
SEED: Cystine-binding periplasmic protein precursor
KEGG: polar amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Nickel (II) chloride 1 mM -0.8 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.4 compare
nophagecontrol 24hr Phyto Lib only +0.5 +2.2 compare
carbon source adipate (C) +0.5 +2.5 compare
phage 36hr PHYTO1 MOI 1 +0.5 +1.9 compare
carbon source D-Glucose 20 mM (C) +0.5 +2.6 compare
phage 36hr PHYTO6 MOI 1 +0.5 +2.0 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.6 +1.8 compare
phage 24hr PHYTO8 MOI 1 +0.6 +3.0 compare
phage 36hr PHYTO3 MOI 1 +0.6 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +1.8 compare
vitamin With vitamins t1 +0.6 +1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.6 +3.0 compare
phage 36hr PHYTO7 MOI 1 +0.7 +2.6 compare
phage 24hr PHYTO9 MOI 10 +0.7 +2.2 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB +0.9 +4.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.4 compare