Fitness data for BPHYT_RS07935 in Burkholderia phytofirmans PsJN

Rrf2 family transcriptional regulator
SEED: Rrf2 family transcriptional regulator, group III

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.5 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.8 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.5 -1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.4 -1.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.1 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.1 -1.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.0 -1.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.0 compare
phage 36hr PHYTO6 MOI 10 +0.9 +1.5 compare
phage 24hr PHYTO3 MOI 0.1 +1.0 +1.7 compare
phage 24hr PHYTO2 MOI 0.1 +1.0 +1.8 compare
phage 24hr PHYTO3 MOI 10 +1.0 +1.5 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +1.2 +2.2 compare
vitamin With vitamins t2 +1.2 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.2 +1.8 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) +1.5 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 +2.5 compare
motility outer cut, LB soft agar motility assay +1.6 +2.9 compare