Fitness data for BPHYT_RS07850 in Burkholderia phytofirmans PsJN

catechol 1,2-dioxygenase
SEED: Catechol 1,2-dioxygenase (EC 1.13.11.1)
KEGG: catechol 1,2-dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.7 -2.3 compare
phage 36hr PHYTO4 MOI 1 -1.4 -1.6 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -1.2 -2.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.2 -2.1 compare
nitrogen source L-Serine (N) -1.1 -1.7 compare
phage 36hr PHYTO4 MOI 0.1 -1.1 -1.7 compare
phage 36hr PHYTO8 MOI 0.1 -1.0 -1.8 compare
carbon source Tween 20 (C) -1.0 -2.4 compare
phage 36hr PHYTO11 MOI 0.1 -1.0 -1.5 compare
phage 36hr PHYTO11 MOI 1 -1.0 -1.8 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.9 -1.7 compare
phage 24hr PHYTO8 MOI 1 -0.9 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.3 compare
nitrogen source L-Lysine (N) -0.8 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.3 compare
phage 24hr PHYTO10 MOI 1 -0.8 -1.6 compare
carbon source propionate (C) +0.9 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.9 +1.4 compare
phage 36hr PHYTO4 MOI 1 +1.1 +1.7 compare
phage 36hr PHYTO3 MOI 1 +1.4 +3.1 compare