Fitness data for BPHYT_RS07735 in Burkholderia phytofirmans PsJN

ABC transporter for L-Arginine, periplasmic substrate-binding component (from data)
Original annotation: ABC transporter substrate-binding protein
SEED: Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
KEGG: lysine/arginine/ornithine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Arginine (C) -3.2 -10.9 compare
phage 36hr PHYTO4 MOI 1 -1.1 -2.4 compare
phage 36hr PHYTO6 MOI 1 -0.8 -2.5 compare
phage 24hr PHYTO10 MOI 10 -0.8 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.8 -2.0 compare
phage 24hr PHYTO6 MOI 10 -0.8 -1.5 compare
nophagecontrol 36hr Phyto Lib only -0.7 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.7 -1.2 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -1.9 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.6 -2.1 compare
no phage control No phage control -0.6 -2.0 compare
phage 24hr PHYTO8 MOI 1 -0.6 -1.9 compare
phage 36hr PHYTO7 MOI 0.1 -0.6 -2.0 compare
phage 24hr PHYTO4 MOI 10 -0.6 -1.0 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.6 -1.9 compare
nophagecontrol 24hr Phyto Lib Only -0.6 -1.6 compare
motility outer cut, LB soft agar motility assay -0.5 -1.9 compare
carbon source Sebacic (C) +0.6 +2.3 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +2.4 compare