Fitness data for BPHYT_RS07680 in Burkholderia phytofirmans PsJN

ABC transporter for L-Arginine, permease component 1 (from data)
Original annotation: histidine/lysine/arginine/ornithine ABC transporter permease HisM
SEED: Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
KEGG: histidine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Arginine (C) -3.1 -10.0 compare
phage 36hr PHYTO2 MOI 1 -1.1 -3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.9 -1.6 compare
phage 36hr PHYTO8 MOI 10 -0.8 -1.8 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.7 -2.2 compare
phage 24hr PHYTO4 MOI 10 -0.7 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.8 compare
carbon source D-Glucose (C) -0.5 -1.8 compare
phage 24hr PHYTO3 MOI 10 -0.5 -1.1 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +1.8 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +2.3 compare
carbon source propionate (C) +0.5 +2.0 compare