Fitness data for BPHYT_RS07600 in Burkholderia phytofirmans PsJN

amino acid ABC transporter substrate-binding protein
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage 24hr PHYTO9 MOI 0.1 -1.5 -2.5 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.3 -2.7 compare
motility inner cut, LB soft agar motility assay -1.2 -2.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.2 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.1 -1.4 compare
phage 36hr PHYTO9 MOI 0.1 -1.0 -1.8 compare
nophagecontrol 24hr Phyto Lib only -1.0 -1.6 compare
temperature LB, 37C -1.0 -2.0 compare
motility outer cut, LB soft agar motility assay -1.0 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -1.2 compare
stress Lomefloxacin 0.001 mM -0.8 -2.9 compare
carbon source Malonic (C) -0.8 -2.1 compare
phage 36hr PHYTO9 MOI 1 -0.8 -1.2 compare
carbon source L-Fucose (C) -0.8 -2.2 compare
stress Cephalothin 2 mg/ml -0.8 -2.6 compare
lb LB -0.7 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.8 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.8 +1.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.0 +1.8 compare