Fitness data for BPHYT_RS07380 in Burkholderia phytofirmans PsJN

membrane protein
SEED: Extracellular Matrix protein PelE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage 24hr PHYTO10 MOI 10 -2.8 -2.8 compare
phage P. phyto PHYTO2 MOI 1 -2.6 -2.6 compare
phage 24hr PHYTO MOI 0.1 -1.5 -2.2 compare
phage 36hr PHYTO9 MOI 1 -1.3 -2.0 compare
phage 36hr PHYTO11 MOI 0.1 -1.1 -1.8 compare
phage 36hr PHYTO10 MOI 10 -1.1 -1.3 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -1.1 -1.2 compare
phage 36hr PHYTO3 MOI 0.1 -1.1 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -1.0 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.5 compare
phage 24hr PHYTO6 MOI 10 -0.9 -1.3 compare
phage 36hr PHYTO10 MOI 10 -0.9 -1.2 compare
phage 24hr PHYTO2 MOI 0.1 -0.9 -1.5 compare
phage 24hr PHYTO8 MOI 1 -0.9 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.3 compare
nitrogen source D-Alanine (N) +0.8 +2.2 compare
stress Zinc 0.5 mM +0.9 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +1.1 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +1.7 compare