Fitness data for BPHYT_RS07360 in Burkholderia phytofirmans PsJN

sugar ABC transporter
SEED: Extracellular Matrix protein PelA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -0.4 -2.4 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.4 -2.2 compare
motility outer cut, LB soft agar motility assay -0.3 -1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 -1.7 compare
phage 24hr PHYTO3 MOI 10 -0.3 -1.5 compare
carbon source L-Fucose (C) +0.3 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.3 +1.7 compare
nutrient L-Histidine +0.3 +2.0 compare
nitrogen source L-Asparagine (N) +0.3 +2.0 compare
temperature LB 37C +0.3 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.3 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3 +2.3 compare
carbon source D-Glucose (C) +0.3 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.9 compare
carbon source L-Arabinose (C) +0.4 +2.8 compare
carbon source Malonic (C) +0.4 +2.6 compare
nitrogen source NAG (N) +0.5 +3.3 compare
carbon source Malonic (C) +0.8 +4.8 compare