Fitness data for BPHYT_RS06215 in Burkholderia phytofirmans PsJN

recombinase RdgC
SEED: DNA recombination-dependent growth factor C
KEGG: recombination associated protein RdgC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage 36hr PHYTO2 MOI 1 -1.7 -1.9 compare
phage 24hr PHYTO3 MOI 10 -1.6 -1.8 compare
phage P. phyto PHYTO2 MOI 1 -1.5 -2.0 compare
phage 36hr PHYTO1 MOI 10 -1.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.7 compare
phage 24hr PHYTO6 MOI 0.1 -1.1 -1.9 compare
phage P. phyto corn MOI 1 -1.0 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -1.6 compare
carbon source L-Fucose (C) -0.9 -1.6 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.9 -2.0 compare
phage 36hr PHYTO2 MOI 0.1 -0.9 -1.6 compare
phage 24hr PHYTO4 MOI 10 -0.8 -1.3 compare
phage 36hr PHYTO4 MOI 0.1 -0.8 -1.7 compare
phage 36hr PHYTO11 MOI 1 -0.8 -1.2 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.8 -2.1 compare
phage 24hr PHYTO3 MOI 1 -0.8 -1.3 compare
motility outer cut, LB soft agar motility assay -0.8 -1.7 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.9 +2.7 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.6 +2.1 compare