Fitness data for BPHYT_RS06005 in Burkholderia phytofirmans PsJN

chorismate--pyruvate lyase
SEED: Chorismate--pyruvate lyase (EC 4.1.3.40)
KEGG: chorismate--pyruvate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Malonic (C) -0.9 -2.8 compare
phage 36hr PHYTO1 MOI 10 -0.8 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.8 -2.5 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.8 -1.8 compare
temperature LB, 37C -0.8 -1.5 compare
nitrogen source L-Lysine (N) -0.7 -1.3 compare
carbon source L-Arginine (C) -0.7 -2.1 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.7 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.7 compare
phage 36hr PHYTO1 MOI 10 -0.6 -1.6 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.6 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.5 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 +1.7 compare
carbon source L-Arabinose (C) +0.7 +2.1 compare
phage P. phyto corn MOI 0.1 +0.7 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.0 compare