Fitness data for BPHYT_RS05085 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: LysR family transcriptional regulator Bucepa02002399

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.2 -2.2 compare
phage 24hr PHYTO2 MOI 0.1 -0.9 -1.7 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.9 -0.8 compare
carbon source Malonic (C) -0.8 -2.3 compare
carbon source D,L-Lactate (C) +0.8 +3.1 compare
pH LB, pH4 +0.8 +3.3 compare
carbon source D-Galacturonic Acid (C) +0.9 +1.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.1 compare
phage 24hr PHYTO6 MOI 10 +0.9 +1.8 compare
carbon source D-Fructose (C) +0.9 +3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X +0.9 +2.3 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.9 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +2.0 compare
vitamin With vitamins t1 +1.0 +2.3 compare
carbon source Xylitol (C) +1.0 +4.1 compare
phage 36hr PHYTO2 MOI 1 +1.0 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +3.6 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +1.2 +2.1 compare
motility outer cut, LB soft agar motility assay +1.5 +2.3 compare