Fitness data for BPHYT_RS04850 in Burkholderia phytofirmans PsJN

TonB-denpendent receptor
SEED: Outer membrane vitamin B12 receptor BtuB
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.6 -3.0 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -0.5 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.1 compare
phage P. phyto PHYTO2 MOI 0.1 -0.4 -2.6 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.4 -2.2 compare
no phage control No phage control -0.4 -2.5 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.6 compare
r2a control R2A control -0.4 -2.7 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.7 compare
phage 24hr PHYTO3 MOI 10 -0.4 -2.2 compare
phage 36hr PHYTO3 MOI 1 -0.3 -2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.1 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.0 compare
phage P. phyto PHYTO2 MOI 1 -0.3 -1.4 compare
phage 24hr PHYTO2 MOI 1 -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.5 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.3 -1.4 compare
nitrogen source L-Glutamic (N) +0.3 +1.5 compare
carbon source Malonic (C) +0.4 +2.6 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 +2.2 compare