Fitness data for BPHYT_RS04430 in Burkholderia phytofirmans PsJN

amino acid ABC transporter ATPase
SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.0 -1.8 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -2.0 -1.2 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.9 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.7 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.1 compare
phage 36hr PHYTO2 MOI 1 -1.5 -0.9 compare
supernatant control Vogels_fungal_media 0.1X +1.3 +1.9 compare
phage 36hr PHYTO10 MOI 10 +1.3 +1.8 compare
phage 24hr PHYTO3 MOI 10 +1.3 +1.1 compare
nophagecontrol 36hr Phyto Lib Only +1.3 +1.3 compare
phage 24hr PHYTO1 MOI 10 +1.4 +1.6 compare
phage 24hr PHYTO2 MOI 0.1 +1.4 +1.3 compare
phage 36hr PHYTO11 MOI 1 +1.5 +2.3 compare
phage 36hr PHYTO6 MOI 10 +1.5 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +1.7 +1.6 compare
carbon source Malonic (C) +1.7 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.8 +2.4 compare
phage 36hr PHYTO11 MOI 0.1 +1.8 +2.9 compare
supernatant control Vogels_fungal_media; pH 5.5 +2.0 +2.8 compare