Fitness data for BPHYT_RS03925 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Chromosome initiation inhibitor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.3 -2.4 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.0 -1.3 compare
nitrogen source NAG (N) -1.0 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.4 compare
carbon source Tween 20 (C) -0.9 -1.9 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.9 -1.7 compare
nophagecontrol 36hr Phyto Lib only -0.8 -1.2 compare
stress Paraquat dichloride 0.032 mg/ml -0.8 -1.2 compare
phage 24hr PHYTO3 MOI 10 +0.7 +1.5 compare
tn7 efficiency Outgrowth after Tn7 transformation +0.7 +2.4 compare
carbon source Malonic (C) +0.7 +1.2 compare
phage 36hr PHYTO4 MOI 1 +0.8 +1.9 compare
temperature LB, 23C +0.8 +1.7 compare
pH LB, pH7 +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.5 compare
motility outer cut, LB soft agar motility assay +0.9 +2.3 compare
motility inner cut, LB soft agar motility assay +1.0 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.2 compare